The problem
How can I run R on HiperGator within my terminal? The interactive RStudio server works okay, but whenever you request a longer running time or more memory, you will wait much longer in queue. I would prefer to just run R CMD BATCH within my terminal.
Solution
It is probably documented somewhere by HiperGator. I just could not find it easily.
Here are the steps I followed.
- Login to HiperGator terminal, install
miniforgeandmamba - Exit terminal and login back again
- In terminal, run
mamba create -n nameofmyenvi r-essentials r-base- add additional packages you want to install, e..g,
r-torch - or install later with
mamba install cuda-toolkit=11.8 pytorch
- add additional packages you want to install, e..g,
mamba activate nameofmyenvi- In terminal, type
Rand now you should be able to open R- If running long time jobs, use
tmuxwithmodule load tmux, thentmux
- If running long time jobs, use